Ecology & Evolutionary Biology

Research Output 1965 2020

2020

PZnet: Efficient 3D ConvNet Inference on Manycore CPUs

Popovych, S., Buniatyan, D., Zlateski, A., Li, K. & Seung, H. S., Jan 1 2020, Advances in Computer Vision - Proceedings of the 2019 Computer Vision Conference CVC. Kapoor, S. & Arai, K. (eds.). Springer Verlag, p. 369-383 15 p. (Advances in Intelligent Systems and Computing; vol. 943).

Princeton University

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Program processors
Convolution
Magnetic resonance imaging
Image analysis
Microscopic examination

Weakly Supervised Deep Metric Learning for Template Matching

Buniatyan, D., Popovych, S., Ih, D., Macrina, T., Zung, J. & Seung, H. S., Jan 1 2020, Advances in Computer Vision - Proceedings of the 2019 Computer Vision Conference CVC. Kapoor, S. & Arai, K. (eds.). Springer Verlag, p. 39-58 20 p. (Advances in Intelligent Systems and Computing; vol. 943).

Princeton University

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Template matching
Supervised learning
Bandpass filters
Learning algorithms
Computer vision
2019

A 64-Tile 2.4-Mb In-Memory-Computing CNN Accelerator Employing Charge-Domain Compute

Valavi, H., Ramadge, P. J., Nestler, E. & Verma, N., Jun 1 2019, In : IEEE Journal of Solid-State Circuits. 54, 6, p. 1789-1799 11 p., 8660469.

Princeton University

Research output: Contribution to journalArticle

Tile
Neurons
Particle accelerators
Convolution
Data storage equipment
5 Citations (Scopus)

Accelerating changes in ice mass within Greenland, and the ice sheet's sensitivity to atmospheric forcing

Bevis, M., Harig, C., Khan, S. A., Brown, A., Simons, F. J., Willis, M., Fettweis, X., Van Den Broeke, M. R., Madsen, F. B., Kendrick, E., Caccamise, D. J., Van Dam, T., Knudsen, P. & Nylen, T., Feb 5 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 6, p. 1934-1939 6 p.

Princeton University

Research output: Contribution to journalArticle

Greenland
Ice Cover
Ice
Climate
Geographic Information Systems
1 Citation (Scopus)

A Cenozoic record of seawater uranium in fossil corals

Gothmann, A. M., Higgins, J. A., Adkins, J. F., Broecker, W., Farley, K. A., McKeon, R., Stolarski, J., Planavsky, N., Wang, X. & Bender, M. L., Apr 1 2019, In : Geochimica et Cosmochimica Acta. 250, p. 173-190 18 p.

Princeton University

Research output: Contribution to journalArticle

Uranium
Seawater
uranium
coral
fossil

Acid-Catalyzed Reactions Activate DMSO as a Reagent in Perovskite Precursor Inks

Hamill, J. C., Sorli, J. C., Pelczer, I., Schwartz, J. & Loo, Y. L., Mar 26 2019, In : Chemistry of Materials. 31, 6, p. 2114-2120 7 p.

Princeton University

Research output: Contribution to journalArticle

Dimethyl Sulfoxide
Ink
Perovskite
Proton transfer
Acids
14 Citations (Scopus)

A complete catalogue of high-quality topological materials

Vergniory, M. G., Elcoro, L., Felser, C., Regnault, N., Bernevig, B. A. & Wang, Z., Feb 28 2019, In : Nature. 566, 7745, p. 480-485 6 p.

Princeton University

Research output: Contribution to journalArticle

Research Personnel
Databases
Electrons

A Computational Framework for Genome-wide Characterization of the Human Disease Landscape

Lee, Y. S., Krishnan, A., Oughtred, R., Rust, J., Chang, C. S., Ryu, J., Kristensen, V. N., Dolinski, K., Theesfeld, C. L. & Troyanskaya, O. G., Feb 27 2019, In : Cell Systems. 8, 2, p. 152-162.e6

Princeton University

Research output: Contribution to journalArticle

Genome
Drug Repositioning
Rare Diseases
Neuroblastoma
Transcriptome

A computationally efficient turnkey approach to turbulent combustion modeling: From elusive fantasy to impending reality

Mueller, M. E., Jan 1 2019, AIAA Scitech 2019 Forum. American Institute of Aeronautics and Astronautics Inc, AIAA, (AIAA Scitech 2019 Forum).

Princeton University

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Convolution
Compressibility
Probability density function
Costs
Turbulence
1 Citation (Scopus)

Active harvesting enhances energy recovery and function of electroactive microbiomes in microbial fuel cells

Lu, L., Lobo, F. L., Xing, D. & Ren, Z., Aug 1 2019, In : Applied Energy. p. 492-502 11 p.

Princeton University

Research output: Contribution to journalArticle

Bioelectric Energy Sources
Microbiota
Recovery of Function
Metagenomics
Electrons
1 Citation (Scopus)

Active learning of uniformly accurate interatomic potentials for materials simulation

Zhang, L., Lin, D. Y., Wang, H., Car, R. & E, W., Feb 25 2019, In : Physical Review Materials. 3, 2, 023804.

Princeton University

Research output: Contribution to journalArticle

Potential energy surfaces
Molecular modeling
Learning systems
Problem-Based Learning

A cyanide-bridged di-manganese carbonyl complex that photochemically reduces CO 2 to CO

Kuo, H. Y., Lee, T. S., Chu, A. T., Tignor, S. E., Scholes, G. D. & Bocarsly, A. B., Jan 1 2019, In : Dalton Transactions. 48, 4, p. 1226-1236 11 p.

Princeton University

Research output: Contribution to journalArticle

Cyanides
Carbon Monoxide
Manganese
Electrocatalysts
Photosensitizing Agents

Adaptive measures for mitigating urban heat islands: The potential of thermochromic materials to control roofing energy balance

Fabiani, C., Pisello, A. L., Bou-Zeid, E. R., Yang, J. & Cotana, F., Aug 1 2019, In : Applied Energy. p. 155-170 16 p.

Princeton University

Research output: Contribution to journalArticle

heat island
Energy balance
energy balance
roof
Roofs
1 Citation (Scopus)

A design for an electromagnetic filter for precision energy measurements at the tritium endpoint

Betti, M. G., Biasotti, M., Boscá, A., Calle, F., Carabe-Lopez, J., Cavoto, G., Chang, C., Chung, W., Cocco, A. G., Colijn, A. P., Conrad, J., D'Ambrosio, N., de Salas, P. F., Faverzani, M., Ferella, A., Ferri, E., Garcia-Abia, P., Gomez-Tejedor, G. G., Gariazzo, S., Gatti, F. & 31 others, Gentile, C., Giachero, A., Gudmundsson, J. E., Hochberg, Y., Kahn, Y., Lisanti, M., Mancini-Terracciano, C., Mangano, G., Marcucci, L. E., Mariani, C., Martínez, J., Messina, M., Molinero-Vela, A., Monticone, E., Nucciotti, A., Pandolfi, F., Pastor, S., Pedrós, J., de los Heros, C. P., Pisanti, O., Polosa, A. D., Puiu, A., Raitses, Y., Rajteri, M., Rossi, N., Santorelli, R., Schaeffner, K., Strid, C. F., Tully, C. G., Zhao, F. & Zurek, K. M., May 1 2019, In : Progress in Particle and Nuclear Physics. 106, p. 120-131 12 p.

Princeton University

Research output: Contribution to journalReview article

tritium
electromagnetism
filters
energy
conservation

Advected glacial seawater preserved in the subsurface of the Maldives carbonate edifice

Blättler, C. L., Higgins, J. A. & Swart, P. K., Jul 15 2019, In : Geochimica et Cosmochimica Acta. 257, p. 80-95 16 p.

Princeton University

Research output: Contribution to journalArticle

Carbonates
Seawater
water mass
seawater
carbonate

AEESP Journal Spotlight: Mid-2019

Deng, B., Masten, S. J., Peters, C. A. & Grasso, D., Jun 1 2019, In : Environmental Engineering Science. 36, 6, 1 p.

Princeton University

Research output: Contribution to journalEditorial

cylindrical coordinates
Cartesian coordinates
boundary conditions
gravitational fields
boundary condition

A gap-protected zero-Hall effect state in the quantum limit of the non-symmorphic metal KHgSb

Liang, S., Kushwaha, S., Gao, T., Hirschberger, M., Li, J., Wang, Z., Stolze, K., Skinner, B., Bernevig, B. A., Cava, R. J. & Ong, N. P., Jan 1 2019, In : Nature Materials.

Princeton University

Research output: Contribution to journalLetter

Hall effect
Surface states
Metals
conductivity
Chemical potential
10 Citations (Scopus)

A genetics-free method for high-throughput discovery of cryptic microbial metabolites

Xu, F., Wu, Y., Zhang, C., Davis, K. M., Moon, K., Bushin, L. B. & Seyedsayamdost, M. R., Feb 1 2019, In : Nature Chemical Biology. 15, 2, p. 161-168 8 p.

Princeton University

Research output: Contribution to journalArticle

Metabolome
Multigene Family
Bacteria
Glycopeptides
Organism Cloning
18 Citations (Scopus)

A Host-Produced Quorum-Sensing Autoinducer Controls a Phage Lysis-Lysogeny Decision

Silpe, J. E. & Bassler, B. L., Jan 10 2019, In : Cell. 176, 1-2, p. 268-280.e13

Princeton University

Research output: Contribution to journalArticle

Lysogeny
Quorum Sensing
Bacteriophages
Bacteria
Cell Count
Outages
Electric power transmission networks
Flow simulation
Power transmission
Classifiers

A library of early Cambrian chemostratigraphic correlations from a reproducible algorithm

Hay, C. C., Creveling, J. R., Hagen, C. J., Maloof, A. C. & Huybers, P., May 1 2019, In : Geology. 47, 5, p. 457-460 4 p.

Princeton University

Research output: Contribution to journalArticle

chronology
fossil
Ediacaran
animal
alignment
S-Adenosylmethionine
Biosynthesis
Biological Products
Ether
Ethers

Alkali-activation of CaO-FeOx-SiO2 slag: Formation mechanism from in-situ X-ray total scattering

Peys, A., White, C. E., Rahier, H., Blanpain, B. & Pontikes, Y., Aug 1 2019, In : Cement and Concrete Research. 122, p. 179-188 10 p.

Princeton University

Research output: Contribution to journalArticle

Alkalies
Slags
Chemical activation
Scattering
Silicates

A low-disorder metal-oxide-silicon double quantum dot

Kim, J. S., Hazard, T. M., Houck, A. A. & Lyon, S. A., Jan 28 2019, In : Applied Physics Letters. 114, 4, 043501.

Princeton University

Research output: Contribution to journalArticle

metal oxides
quantum dots
disorders
silicon
electrons
1 Citation (Scopus)

A microbial factory for defensive kahalalides in a tripartite marine symbiosis

Zan, J., Li, Z., Diarey Tianero, M., Davis, J., Hill, R. T. & Abou Donia, M. S., Jun 14 2019, In : Science. 364, 6445, eaaw6732.

Princeton University

Research output: Contribution to journalArticle

Symbiosis
Mollusca
Libraries
Ecosystem
Bacteria
2 Citations (Scopus)

Amine additive reactions induced by the soft Lewis acidity of Pb2+ in halide perovskites. Part I: Evidence for Pb-alkylamide formation

Kerner, R. A., Schloemer, T. H., Schulz, P., Berry, J. J., Schwartz, J., Sellinger, A. & Rand, B. P., Jan 1 2019, In : Journal of Materials Chemistry C. 7, 18, p. 5251-5259 9 p.

Princeton University

Research output: Contribution to journalArticle

Acidity
Perovskite
Amines
formic acid
Passivation
2 Citations (Scopus)

Amine additive reactions induced by the soft Lewis acidity of Pb2+ in halide perovskites. Part II: Impacts of amido Pb impurities in methylammonium lead triiodide thin films

Kerner, R. A., Schloemer, T. H., Schulz, P., Berry, J. J., Schwartz, J., Sellinger, A. & Rand, B. P., Jan 1 2019, In : Journal of Materials Chemistry C. 7, 18, p. 5244-5250 7 p.

Princeton University

Research output: Contribution to journalArticle

Acidity
Amines
Lead
Impurities
Thin films
1 Citation (Scopus)

Amorphous nanoparticles by self-assembly: processing for controlled release of hydrophobic molecules

Feng, J., Zhang, Y., McManus, S. A., Qian, R., Ristroph, K. D., Ramachandruni, H., Gong, K., White, C. E., Rawal, A. & Prud'homme, R. K., Jan 1 2019, In : Soft Matter. 15, 11, p. 2400-2410 11 p.

Princeton University

Research output: Contribution to journalArticle

Self assembly
self assembly
Nanoparticles
Zein
nanoparticles
1 Citation (Scopus)

A motivational game-theoretic approach for peer-to-peer energy trading in the smart grid

Tushar, W., Saha, T. K., Yuen, C., Morstyn, T., McCulloch, M. D., Poor, H. V. & Wood, K. L., Jun 1 2019, In : Applied Energy. p. 10-20 11 p.

Princeton University

Research output: Contribution to journalArticle

psychology
energy
Electricity
Carbon
winter

Amplitude constrained MIMO channels: Properties of optimal input distributions and bounds on the capacity

Dytso, A., Goldenbaum, M., Poor, H. V. & Shamai (Shitz), S., Feb 1 2019, In : Entropy. 21, 2, 200.

Princeton University

Research output: Contribution to journalArticle

Open Access
MIMO (control systems)
matrices
antennas
2 Citations (Scopus)

Anaerobic ammonium oxidation coupled to iron reduction in constructed wetland mesocosms

Shuai, W. & Jaffe, P. R., Jan 15 2019, In : Science of the Total Environment. 648, p. 984-992 9 p.

Princeton University

Research output: Contribution to journalArticle

Wetlands
constructed wetland
Ammonium Compounds
ammonium
Iron

An asymmetric rainfall response to ENSO in East Asia

Ng, C. H. J., Vecchi, G. A., Muñoz, Á. G. & Murakami, H., Feb 15 2019, In : Climate Dynamics. 52, 3-4, p. 2303-2318 16 p.

Princeton University

Research output: Contribution to journalArticle

El Nino-Southern Oscillation
rainfall
moisture flux
fluid dynamics
temperature anomaly

An Autoinducer Analogue Reveals an Alternative Mode of Ligand Binding for the LasR Quorum-Sensing Receptor

Paczkowski, J. E., McCready, A. R., Cong, J. P., Li, Z., Jeffrey, P. D., Smith, C. D., Henke, B. R., Hughson, F. M. & Bassler, B. L., Mar 15 2019, In : ACS chemical biology. 14, 3, p. 378-389 12 p.

Princeton University

Research output: Contribution to journalArticle

Quorum Sensing
Ligands
Artificial Receptors
Lactones
Cell Communication

An autoinducer-independent RhlR quorum-sensing receptor enables analysis of RhlR regulation

McCready, A. R., Paczkowski, J. E., Cong, J. P. & Bassler, B. L., Jun 1 2019, In : PLoS pathogens. 15, 6, p. e1007820

Princeton University

Research output: Contribution to journalArticle

Open Access
Quorum Sensing
Pyocyanine
Virulence Factors
Biofilms
Ligands
2 Citations (Scopus)

An early diagenetic deglacial origin for basal Ediacaran “cap dolostones”

Ahm, A. S. C., Maloof, A. C., Macdonald, F. A., Hoffman, P. F., Bjerrum, C. J., Bold, U., Rose, C. V., Strauss, J. V. & Higgins, J. A., Jan 15 2019, In : Earth and Planetary Science Letters. 506, p. 292-307 16 p.

Princeton University

Research output: Contribution to journalArticle

Ediacaran
dolostone
caps
Sediments
Seawater

A new kind of cyclic universe

Ijjas, A. & Steinhardt, P. J., Aug 10 2019, In : Physics Letters, Section B: Nuclear, Elementary Particle and High-Energy Physics. 795, p. 666-672 7 p.

Princeton University

Research output: Contribution to journalArticle

Open Access
universe
big bang cosmology
isotropy
flatness
monopoles
1 Citation (Scopus)

Animal coloration patterns: Linking spatial vision to quantitative analysis

Stoddard, M. C. & Osorio, D., Feb 1 2019, In : American Naturalist. 193, 2, p. 164-186 23 p.

Princeton University

Research output: Contribution to journalArticle

quantitative analysis
color
animal
animals
statistics

Anthropogenic modifications to fire regimes in the wider Serengeti-Mara ecosystem

Probert, J. R., Parr, C. L., Holdo, R. M., Anderson, T. M., Archibald, S., Courtney Mustaphi, C. J., Dobson, A. P., Donaldson, J. E., Hopcraft, G. C., Hempson, G. P., Morrison, T. A. & Beale, C. M., Jan 1 2019, In : Global Change Biology.

Princeton University

Research output: Contribution to journalArticle

Open Access
Ecosystems
Fires
ecosystem
Agriculture
livestock

Anthropogenic nitrogen inputs and impacts on oceanic N2O fluxes in the northern Indian Ocean: The need for an integrated observation and modelling approach

Suntharalingam, P., Zamora, L. M., Bange, H. W., Bikkina, S., Buitenhuis, E., Kanakidou, M., Lamarque, J. F., Landolfi, A., Resplandy, L., Sarin, M. M., Seitzinger, S. & Singh, A., Aug 1 2019, In : Deep-Sea Research Part II: Topical Studies in Oceanography. 166, p. 104-113 10 p.

Princeton University

Research output: Contribution to journalArticle

nitrogen
modeling
nitrogen cycle
prediction
nitrous oxide

Apparent competition, lion predation, and managed livestock Grazing: Can conservation value be enhanced?

Ng'weno, C. C., Buskirk, S. W., Georgiadis, N. J., Gituku, B. C., Kibungei, A. K., Porensky, L. M., Rubenstein, D. I. & Goheen, J. R., Jan 1 2019, In : Frontiers in Ecology and Evolution. 7, APR, 123.

Princeton University

Research output: Contribution to journalArticle

Open Access
apparent competition
Panthera leo
livestock
grazing
predation

Approximate Nash region of the Gaussian interference channel with noisy output feedback

Quintero, V., Perlaza, S. M., Gorce, J. M. & Poor, H. V., Jan 15 2019, 2018 IEEE Information Theory Workshop, ITW 2018. Institute of Electrical and Electronics Engineers Inc., 8613358. (2018 IEEE Information Theory Workshop, ITW 2018).

Princeton University

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transceivers
Feedback

A PRDM16-Driven Metabolic Signal from Adipocytes Regulates Precursor Cell Fate

Wang, W., Ishibashi, J., Trefely, S., Shao, M., Cowan, A. J., Sakers, A., Lim, H. W., O'Connor, S., Doan, M. T., Cohen, P., Baur, J. A., King, M. T., Veech, R. L., Won, K. J., Rabinowitz, J. D., Snyder, N. W., Gupta, R. K. & Seale, P., Jul 2 2019, In : Cell Metabolism. 30, 1, p. 174-189.e5

Princeton University

Research output: Contribution to journalArticle

Adipocytes
Fibrosis
Hydroxybutyrates
Adipogenesis
Adrenergic Agonists

Architectural Support for Containment-based Security

Zhang, H., Ghosh, S., Fix, J., Apostolakis, S., Beard, S. R., Nagendra, N. P., Oh, T. & August, D. I., Apr 4 2019, ASPLOS 2019 - 24th International Conference on Architectural Support for Programming Languages and Operating Systems. Association for Computing Machinery, p. 361-377 17 p. (International Conference on Architectural Support for Programming Languages and Operating Systems - ASPLOS).

Princeton University

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
Hardware
Communication
Security systems
Supply chains
Formal verification
1 Citation (Scopus)

Are forest-shrubland mosaics of the Cape Floristic Region an example of alternate stable states?

Cramer, M. D., Power, S. C., Belev, A., Gillson, L., Bond, W. J., Hoffman, M. T. & Hedin, L. O., Apr 1 2019, In : Ecography. 42, 4, p. 717-729 13 p.

Princeton University

Research output: Contribution to journalArticle

Cape Floristic Region
fynbos
shrubland
shrublands
vegetation
1 Citation (Scopus)

A Resolution Study of Magnetically Arrested Disks

White, C. J., Stone, J. M. & Quataert, E., Apr 1 2019, In : Astrophysical Journal. 874, 2, 168.

Princeton University

Research output: Contribution to journalArticle

magnetohydrodynamics
metal spinning
magnetic flux
synchrotrons
simulation
Open Access
satellite imagery
water depth
calibration
benthic environment
bathymetry

AsmDB: Understanding and mitigating front-end stalls in warehouse-scale computers

Ayers, G., Nagendra, N. P., August, D. I., Cho, H. K., Kanev, S., Kozyrakis, C., Krishnamurthy, T., Litz, H., Moseley, T. & Ranganathan, P., Jun 22 2019, ISCA 2019 - Proceedings of the 2019 46th International Symposium on Computer Architecture. Institute of Electrical and Electronics Engineers Inc., p. 462-473 12 p. (Proceedings - International Symposium on Computer Architecture).

Princeton University

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Warehouses
Hardware
Flow graphs
Sampling
Feedback

Assessing the Resilience of the Texas Power Grid Network

Ofori-Boateng, D., Dey, A. K., Gel, Y. R., Li, B., Zhang, J. & Poor, H. V., Jun 1 2019, 2019 IEEE Data Science Workshop, DSW 2019 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 280-284 5 p. 8755787. (2019 IEEE Data Science Workshop, DSW 2019 - Proceedings).

Princeton University

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Structural properties
1 Citation (Scopus)

Assessing the stability of unreinforced masonry arches and vaults: a comparison of analytical and numerical strategies

Fang, D. L., Napolitano, R. K., Michiels, T. L. & Adriaenssens, S. M., Jul 4 2019, In : International Journal of Architectural Heritage. 13, 5, p. 648-662 15 p.

Princeton University

Research output: Contribution to journalArticle

Arches
Friction
Jetties
Geometry
Masonry