Projects per year
Personal profile
Research interests
Research Expertise:
Computer-aided Drug Design | Molecular Dynamics Simulation | Molecular Modeling
The long-term goal of my research program is to gain mechanic insights into the structure, dynamics and function of pharmacologically important biomolecules. The insights enable rational drug design using a hierarchical virtual screening protocol including docking, molecular dynamics simulation, and free energy perturbation methods. My current research aims to: 1) develop novel cancer drugs that target DNA/RNA-quadruples, transporter (ABCB1) and kinase (MLK); 2) develop novel analgesic and anti-drug-addiction agents that target G-protein coupled receptors (GPCR) (Dopamine, TAAR1, Opioid) membrane receptors; 3) develop novel anti-virus drugs against herpes virus entry (gD); 4) develop diabetes drug that simultaneously targets inflammation (PPAR).
Honors and Awards:
2010, Travel Award, the IBBI (Isolated Biomolecules and Biomolecular Interactions) conference, Berlin, Germany
2004, Named to the Dean’s list in recognition of Scholastic Excellence, University of Delaware
1999, Excellent Thesis, Xiamen University
Member of:
American Chemical Society (www.acs.org)
Education/Academic qualification
Doctor of Philosophy, doctorate, University of Delaware
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Projects
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Binding of a positive allosteric modulator CDPPB to metabotropic glutamate receptor type 5 (mGluR5) probed by all-atom molecular dynamics simulations
Uba, A. I., Chea, J., Hoag, H., Hryb, M., Bui-Linh, C. & Wu, C., Nov 15 2022, In: Life Sciences. 309, 121014.Research output: Contribution to journal › Article › peer-review
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Binding of GS-461203 and Its Halogen Derivatives to HCV Genotype 2a RNA Polymerase Drug Resistance Mutants
Arba, M., Wahyudi, S. T., Zubair, M. S., Brunt, D., Singh, M. & Wu, C., Jun 2022, In: Scientia Pharmaceutica. 90, 2, 26.Research output: Contribution to journal › Article › peer-review
Open Access -
Computational insights into differential interaction of mammalian angiotensin-converting enzyme 2 with the SARS-CoV-2 spike receptor binding domain
Lupala, C. S., Kumar, V., Su, X. D., Wu, C. & Liu, H., Feb 2022, In: Computers in Biology and Medicine. 141, 105017.Research output: Contribution to journal › Article › peer-review
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Discovering new potential inhibitors to SARS-CoV-2 RNA dependent RNA polymerase (RdRp) using high throughput virtual screening and molecular dynamics simulations
Brunt, D., Lakernick, P. M. & Wu, C., Dec 2022, In: Scientific reports. 12, 1, 19986.Research output: Contribution to journal › Article › peer-review
Open Access -
Elucidation of partial activation of cannabinoid receptor type 2 and identification of potential partial agonists: Molecular dynamics simulation and structure-based virtual screening
Uba, A. I., Aluwala, H., Liu, H. & Wu, C., Aug 2022, In: Computational Biology and Chemistry. 99, 107723.Research output: Contribution to journal › Article › peer-review