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2018

A residue of motif III positions the helicase domains of motor subunit HsdR in restriction-modification enzyme EcoR124I

Sinha, D., Bialevich, V., Shamayeva, K., Guzanova, A., Sisakova, A., Csefalvay, E., Reha, D., Krejci, L., Carey, J., Weiserova, M. & Ettrich, R., Jul 1 2018, In : Journal of Molecular Modeling. 24, 7, 176.

Princeton University

Research output: Contribution to journalArticle

The helical domain of the EcoR124I motor subunit participates in ATPase activity and dsDNA translocation

Bialevich, V., Sinha, D., Shamayeva, K., Guzanova, A., Řeha, D., Csefalvay, E., Carey, J., Weiserova, M. & Ettrich, R. H., Jan 1 2017, In : PeerJ. 2017, 1, e2887.

Princeton University

Research output: Contribution to journalArticle

2016

Binding and inhibition of spermidine synthase from Plasmodium falciparum and implications for in vitro inhibitor testing

Sprenger, J., Carey, J., Svensson, B., Wengel, V. & Persson, L., Sep 2016, In : PLoS ONE. 11, 9, e0163442.

Princeton University

Research output: Contribution to journalArticle

Quantum Calculations Indicate Effective Electron Transfer between FMN and Benzoquinone in a New Crystal Structure of Escherichia coli WrbA

Degtjarik, O., Brynda, J., Ettrichova, O., Kuty, M., Sinha, D., Kuta Smatanova, I., Carey, J., Ettrich, R. & Řeha, D., Jun 9 2016, In : Journal of Physical Chemistry B. 120, 22, p. 4867-4877 11 p.

Princeton University

Research output: Contribution to journalArticle

2015

Functional coupling of duplex translocation to DNA cleavage in a Type I restriction enzyme

Csefalvay, E., Lapkouski, M., Guzanova, A., Csefalvay, L., Baikova, T., Shevelev, I., Bialevich, V., Shamayeva, K., Janscak, P., Smatanova, I. K., Panjikar, S., Carey, J., Weiserova, M. & Ettrich, R., Jun 3 2015, In : PLoS ONE. 10, 6, e0128700.

Princeton University

Research output: Contribution to journalArticle

Three-dimensional structures of Plasmodium falciparum spermidine synthase with bound inhibitors suggest new strategies for drug design

Sprenger, J., Svensson, B., Hålander, J., Carey, J., Persson, L. & Al-Karadaghi, S., Mar 1 2015, In : Acta Crystallographica Section D: Biological Crystallography. 71, p. 484-493 10 p.

Princeton University

Research output: Contribution to journalArticle

2014

Binding-competent states for L-arginine in E. coli arginine repressor apoprotein

Pandey, S. K., Řeha, D., Zayats, V., Melichercik, M., Carey, J. & Ettrich, R., Jan 1 2014, In : Journal of Molecular Modeling. 20, 7, 2330.

Princeton University

Research output: Contribution to journalArticle

Interdomain communication in the endonuclease/motor subunit of type I restriction-modification enzyme EcoR124I

Sinha, D., Shamayeva, K., Ramasubramani, V., Řeha, D., Bialevich, V., Khabiri, M., Guzanová, A., Milbar, N., Weiserová, M., Csefalvay, E., Carey, J. & Ettrich, R., Jul 2014, In : Journal of Molecular Modeling. 20, 7, 2334.

Princeton University

Research output: Contribution to journalArticle

Molecular dynamics comparison of E. coli WrbA apoprotein and holoprotein

Reha, D., Harish, B., Sinha, D., Kukacka, Z., McSally, J., Ettrichova, O., Novak, P., Carey, J. & Ettrich, R., Sep 1 2014, In : Journal of Molecular Modeling. 20, 9, p. 1-14 14 p., 2400.

Princeton University

Research output: Contribution to journalArticle

2013

1.2 Å resolution crystal structure of Escherichia coli WrbA holoprotein

Kishko, I., Carey, J., Reha, D., Brynda, J., Winkler, R., Harish, B., Guerra, R., Ettrichova, O., Kukacka, Z., Sheryemyetyeva, O., Novak, P., Kuty, M., Kuta Smatanova, I., Ettrich, R. & Lapkouski, M., Sep 1 2013, In : Acta Crystallographica Section D: Biological Crystallography. 69, 9, p. 1748-1757 10 p.

Princeton University

Research output: Contribution to journalArticle

Calmodulin transduces Ca2+ oscillations into differential regulation of its target proteins

Slavov, N., Carey, J. & Linse, S., Apr 17 2013, In : ACS chemical neuroscience. 4, 4, p. 601-612 12 p.

Princeton University

Research output: Contribution to journalArticle

2012

Biphasic Kinetic Behavior of E. coli WrbA, an FMN-Dependent NAD(P)H:Quinone Oxidoreductase

Kishko, I., Harish, B., Zayats, V., Reha, D., Tenner, B., Beri, D., Gustavsson, T., Ettrich, R. & Carey, J., Aug 29 2012, In : PLoS ONE. 7, 8, e43902.

Princeton University

Research output: Contribution to journalArticle

Raman Spectroscopy Adds Complementary Detail to the High-Resolution X-Ray Crystal Structure of Photosynthetic PsbP from Spinacia oleracea

Kopecky, V., Kohoutova, J., Lapkouski, M., Hofbauerova, K., Sovova, Z., Ettrichova, O., González-Pérez, S., Dulebo, A., Kaftan, D., Kuta Smatanova, I., Revuelta, J. L., Arellano, J. B., Carey, J. & Ettrich, R., Oct 5 2012, In : PLoS ONE. 7, 10, e46694.

Princeton University

Research output: Contribution to journalArticle

2010

Symmetric allosteric mechanism of hexameric Escherichia coli arginine repressor exploits competition between L-arginine ligands and resident arginine residues

Strawn, R., Melichercik, M., Green, M., Stockner, T., Carey, J. & Ettrich, R., Jun 1 2010, In : PLoS computational biology. 6, 6, p. 1-12 12 p.

Princeton University

Research output: Contribution to journalArticle

2009

Role of protein surface charge in monellin sweetness

Xue, W. F., Szczepankiewicz, O., Thulin, E., Linse, S. & Carey, J., Mar 1 2009, In : Biochimica et Biophysica Acta - Proteins and Proteomics. 1794, 3, p. 410-420 11 p.

Princeton University

Research output: Contribution to journalArticle

Structural organization of WrbA in apo- and holoprotein crystals

Wolfova, J., Smatanova, I. K., Brynda, J., Mesters, J. R., Lapkouski, M., Kuty, M., Natalello, A., Chatterjee, N., Chern, S. Y., Ebbel, E., Ricci, A., Grandori, R., Ettrich, R. & Carey, J., Sep 1 2009, In : Biochimica et Biophysica Acta - Proteins and Proteomics. 1794, 9, p. 1288-1298 11 p.

Princeton University

Research output: Contribution to journalArticle

Structure of the motor subunit of type I restriction-modification complex EcoR124I

Lapkouski, M., Panjikar, S., Janscak, P., Smatanova, I. K., Carey, J., Ettrich, R. & Csefalvay, E., Jan 1 2009, In : Nature Structural and Molecular Biology. 16, 1, p. 94-95 2 p.

Princeton University

Research output: Contribution to journalArticle

2007

Crystallization and preliminary diffraction analysis of Escherichia coli WrbA in complex with its cofactor flavin mononucleotide

Wolfová, J., Mesters, J. R., Brynda, J., Grandori, R., Natalello, A., Carey, J. & Kutá Smatanová, I., Jun 15 2007, In : Acta Crystallographica Section F: Structural Biology and Crystallization Communications. 63, 7, p. 571-575 5 p.

Princeton University

Research output: Contribution to journalArticle

Open-ended assignments and student responsibility

Brauner, A., Carey, J., Henriksson, M., Sunnerhagen, M. & Ehrenborg, E., May 1 2007, In : Biochemistry and Molecular Biology Education. 35, 3, p. 187-192 6 p.

Princeton University

Research output: Contribution to journalArticle

Role of flavin mononucleotide in the thermostability and oligomerization of Escherichia coli stress-defense protein WrbA

Natalello, A., Doglia, S. M., Carey, J. & Grandori, R., Jan 16 2007, In : Biochemistry. 46, 2, p. 543-553 11 p.

Princeton University

Research output: Contribution to journalArticle

WrbA bridges bacterial flavodoxins and eukaryotic NAD(P)H:quinone oxidoreductases

Carey, J., Brynda, J., Wolfová, J., Grandori, R., Gustavsson, T., Ettrich, R. & Smatanová, I. K., Oct 1 2007, In : Protein Science. 16, 10, p. 2301-2305 5 p.

Princeton University

Research output: Contribution to journalArticle

2006

Spectroelectrochemical investigation of a flavoprotein with a flavin-modified gold electrode

Nöll, G., Kozma, E., Grandori, R., Carey, J., Schödl, T., Hauska, G. & Daub, J., Feb 28 2006, In : Langmuir. 22, 5, p. 2378-2383 6 p.

Princeton University

Research output: Contribution to journalArticle

Why WrbA is weaker than flavodoxin in binding FMN. A molecular modeling study

Ji, H. F., Shen, L., Carey, J., Grandori, R. & Zhang, H. Y., May 30 2006, In : Journal of Molecular Structure: THEOCHEM. 764, 1-3, p. 155-160 6 p.

Princeton University

Research output: Contribution to journalArticle

Asymmetric allosteric activation of the symmetric ArgR hexamer

Jin, L., Xue, W. F., Fukayama, J. W., Yetter, J., Pickering, M. & Carey, J., Feb 11 2005, In : Journal of molecular biology. 346, 1, p. 43-56 14 p.

Princeton University

Research output: Contribution to journalArticle

Crystallization of the flavoprotein WrbA optimized by using additives and gels

Wolfova, J., Grandori, R., Kozma, E., Chatterjee, N., Carey, J. & Smatanova, I. K., Nov 1 2005, In : Journal of Crystal Growth. 284, 3-4, p. 502-505 4 p.

Princeton University

Research output: Contribution to journalArticle

Transmembrane S1 mutations in CNGA3 from achromatopsia 2 patients cause loss of function and impaired cellular trafficking of the cone CNG channel

Patel, K. A., Bartoli, K. M., Fandino, R. A., Ngatchou, A. N., Woch, G., Carey, J. & Tanaka, J. C., Dec 1 2005, In : Investigative Ophthalmology and Visual Science. 46, 7, p. 2282-2290 9 p.

Princeton University

Research output: Contribution to journalArticle

2004

Biophysical properties of regions flanking the bHLH-Zip motif in the p22 Max protein

Pursglove, S. E., Fladvad, M., Bellanda, M., Moshref, A., Henriksson, M., Carey, J. & Sunnerhagen, M., Oct 22 2004, In : Biochemical and Biophysical Research Communications. 323, 3, p. 750-759 10 p.

Princeton University

Research output: Contribution to journalArticle

Multi-method global analysis of thermodynamics and kinetics in reconstitution of monellin

Xue, W. F., Carey, J. & Linse, S., Nov 15 2004, In : Proteins: Structure, Function and Genetics. 57, 3, p. 586-595 10 p.

Princeton University

Research output: Contribution to journalArticle

2002

Three-dimensional solution NMR structure of Apo-L75F-TrpR, a temperature-sensitive mutant of the tryptophan repressor protein

Tyler, R., Pelczer, I., Carey, J. & Copié, V., Oct 8 2002, In : Biochemistry. 41, 40, p. 11954-11962 9 p.

Princeton University

Research output: Contribution to journalArticle

2001

A functioning chimera of the cyclic nucleotide-binding domain from the bovine retinal rod ion channel and the DNA-binding domain from catabolite gene-activating protein

Scott, S. P., Weber, I. T., Harrison, R. W., Carey, J. & Tanaka, J. C., Jun 26 2001, In : Biochemistry. 40, 25, p. 7464-7473 10 p.

Princeton University

Research output: Contribution to journalArticle

Quantitative analysis of DNA binding by the Escherichia coli arginine repressor

Szwajkajzer, D., Dai, L., Fukayama, J. W., Abramczyk, B., Fairman, R. & Carey, J., Oct 5 2001, In : Journal of molecular biology. 312, 5, p. 949-962 14 p.

Princeton University

Research output: Contribution to journalArticle

Globularity and protein function

Carey, J., Dec 1 2000, In : Journal of Biomolecular Structure and Dynamics. 17, SUPPL. 1, p. 87-88 2 p.

Princeton University

Research output: Contribution to journalArticle

1999

Cooperative folding units of Escherichia coli tryptophan repressor

Wallqvist, A., Lavoie, T. A., Chanatry, J. A., Covell, D. G. & Carey, J., Sep 1999, In : Biophysical journal. 77, 3, p. 1619-1626 8 p.

Princeton University

Research output: Contribution to journalArticle

Long-range effects on dynamics in a temperature-sensitive mutant of trp repressor

Jin, L., Fukayama, J. W., Pelczer, I. & Carey, J., Jan 8 1999, In : Journal of molecular biology. 285, 1, p. 361-378 18 p.

Princeton University

Research output: Contribution to journalArticle

Protein purification with vapor-phase carbon dioxide

Winters, M. A., Frankel, D. Z., Debenedetti, P. G., Carey, J., Devaney, M. & Przybycien, T. M., Feb 5 1999, In : Biotechnology and Bioengineering. 62, 3, p. 247-258 12 p.

Princeton University

Research output: Contribution to journalArticle

Role of heme in structural organization of cytochrome c probed by semisynthesis

Kang, X. & Carey, J., Nov 30 1999, In : Biochemistry. 38, 48, p. 15944-15951 8 p.

Princeton University

Research output: Contribution to journalArticle

Structural organization in peptide fragments of cytochrome c by heme binding

Kang, X. & Carey, J., Jan 15 1999, In : Journal of molecular biology. 285, 2, p. 463-468 6 p.

Princeton University

Research output: Contribution to journalArticle

1998

Biochemical characterization of WrbA, founding member of a new family of multimeric flavodoxin-like proteins

Grandori, R., Khalifah, P., Boice, J. A., Fairman, R., Giovanielli, K. & Carey, J., Aug 14 1998, In : Journal of Biological Chemistry. 273, 33, p. 20960-20966 7 p.

Princeton University

Research output: Contribution to journalArticle

Water molecules in DNA recognition I: Hydration lifetimes of trp operator DNA in solution measured by NMR spectroscopy

Sunnerhagen, M., Denisov, V. P., Venu, K., Bonvin, A. M. J. J., Carey, J., Halle, B. & Otting, G., Oct 2 1998, In : Journal of molecular biology. 282, 4, p. 847-858 12 p.

Princeton University

Research output: Contribution to journalArticle

1997

A three-step PCR protocol for construction of chimeric proteins

Grandori, R., Struck, K., Giovanielli, K. & Carey, J., Dec 1 1997, In : Protein Engineering. 10, 9, p. 1099-1100 2 p.

Princeton University

Research output: Contribution to journalArticle

Long-term and high-temperature storage of supercritically-processed microparticulate protein powders

Winters, M. A., Debenedetti, P. G., Carey, J., Sparks, H. G., Sane, S. U. & Przybycien, T. M., Nov 20 1997, In : Pharmaceutical research. 14, 10, p. 1370-1378 9 p.

Princeton University

Research output: Contribution to journalArticle

Molecular biological constraints on ligand-binding affinity and specificity

Szwajkajzer, D. & Carey, J., Jan 1 1997, In : Biopolymers. 44, 2, p. 181-198 18 p.

Princeton University

Research output: Contribution to journalArticle

Solution structure of the DNA-binding domain and model for the complex of multifunctional hexameric arginine repressor with DNA

Sunnerhagen, M., Nilges, M., Otting, G. & Carey, J., Oct 22 1997, In : Nature structural biology. 4, 10, p. 819-826 8 p.

Princeton University

Research output: Contribution to journalArticle

1996

In vivo and in vitro studies of TrpR-DNA interactions

Yang, J., Gunasekera, A., Lavoie, T. A., Jin, L., Lewis, D. E. A. & Carey, J., Apr 26 1996, In : Journal of molecular biology. 258, 1, p. 37-52 16 p.

Princeton University

Research output: Contribution to journalArticle

1995

Footprint phenotypes: Structural models of DNA-binding proteins from chemical modification analysis of DNA

Yang, J. & Carey, J., Jan 1 1995, In : Methods in enzymology. 259, C, p. 452-468 17 p.

Princeton University

Research output: Contribution to journalArticle

The DNA-binding Domain of the Hexameric Arginine Repressor

Grandori, R., Lavoie, T. A., Pflumm, M., Tian, G., Niersbach, H., Maas, W. K., Fairman, R. & Carey, J., Nov 24 1995, In : Journal of molecular biology. 254, 2, p. 150-162 13 p.

Princeton University

Research output: Contribution to journalArticle

1994

Being direct

Carey, J. & Lanoie, T. A., Jan 1 1994, In : Nature structural biology. 1, 10, 1 p.

Princeton University

Research output: Contribution to journalArticle