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Research Output 1986 2020

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Article
2015
9 Citations (Scopus)

Full correlation matrix analysis (FCMA): An unbiased method for task-related functional connectivity

Wang, Y., Cohen, J. D., Li, K. & Turk-Browne, N., May 1 2015, In : Journal of Neuroscience Methods. 251, p. 108-119 12 p.

Princeton University

Research output: Contribution to journalArticle

Brain
Seeds
Multivariate Analysis
Benchmarking
Visual Cortex
47 Citations (Scopus)

Targeted exploration and analysis of large cross-platform human transcriptomic compendia

Zhu, Q., Wong, A. K., Krishnan, A., Aure, M. R., Tadych, A., Zhang, R., Corney, D. C., Greene, C. S., Bongo, L. A., Kristensen, V. N., Charikar, M., Li, K. & Troyanskaya, O. G., Feb 26 2015, In : Nature Methods. 12, 3, p. 211-214 4 p.

Princeton University

Research output: Contribution to journalArticle

Microarrays
Search engines
Metadata
Visualization
Genes
2011
21 Citations (Scopus)

Management of multilevel, multiclient cache hierarchies with application hints

Yadgar, G., Factor, M., Li, K. & Schuster, A., May 1 2011, In : ACM Transactions on Computer Systems. 29, 2, 5.

Princeton University

Research output: Contribution to journalArticle

Information management
2010
53 Citations (Scopus)

DFS: A file system for virtualized flash storage

Josephson, W. K., Bongo, L. A., Li, K. & Flynn, D., Sep 1 2010, In : ACM Transactions on Storage. 6, 3, 14.

Princeton University

Research output: Contribution to journalArticle

Virtual storage
Flash memory
Program processors
Data storage equipment
2009
27 Citations (Scopus)

Directing experimental biology: A case study in mitochondrial biogenesis

Hibbs, M. A., Myers, C. L., Huttenhower, C., Hess, D. C., Li, K., Caudy, A. A. & Troyanskaya, O. G., Mar 1 2009, In : PLoS computational biology. 5, 3

Princeton University

Research output: Contribution to journalArticle

Organelle Biogenesis
Biology
case studies
Biological Sciences
Genes
2008
15 Citations (Scopus)

HPP: An architecture for high performance and utility computing

Sun, N. H., Li, K. & Chen, M. Y., Sep 1 2008, In : Jisuanji Xuebao/Chinese Journal of Computers. 31, 9, p. 1503-1508 6 p.

Princeton University

Research output: Contribution to journalArticle

Program processors
Processing
Computer architecture
Computer operating systems
Communication
2007
171 Citations (Scopus)

Exploring the functional landscape of gene expression: Directed search of large microarray compendia

Hibbs, M. A., Hess, D. C., Myers, C. L., Huttenhower, C., Li, K. & Troyanskaya, O. G., Oct 15 2007, In : Bioinformatics. 23, 20, p. 2692-2699 8 p.

Princeton University

Research output: Contribution to journalArticle

Microarrays
Gene expression
Microarray
Gene Expression
Query
27 Citations (Scopus)

Simulation of fusion plasmas: Current status and future direction

Batchelor, D. A., Beck, M., Becoulet, A., Budny, R. V., Chang, C. S., Diamond, P. H., Dong, J. Q., Fu, G. Y., Fukuyama, A., Hahm, T. S., Keyes, D. E., Kishimoto, Y., Klasky, S., Lao, L. L., Li, K., Lin, Z., Ludaescher, B., Manickam, J., Nakajima, N., Ozeki, T. & 9 others, Podhorszki, N., Tang, W. M., Vouk, M. A., Waltz, R. E., Wang, S. J., Wilson, H. R., Xu, X. Q., Yagi, M. & Zonca, F., Jun 1 2007, In : Plasma Science and Technology. 9, 3, p. 312-387 76 p.

Princeton University

Research output: Contribution to journalArticle

2006
7 Citations (Scopus)
Wireless sensor networks
Fusion reactions
Network protocols
Sensor nodes
Sensor networks
2005
9 Citations (Scopus)

Bridging the Digital Divide: Storage Media + Postal Network = Generic High-Bandwidth Communication

Garg, N., Sobti, S., Lai, J., Zheng, F., Li, K., Wang, R. Y. & Krishnamurthy, A., May 1 2005, In : ACM Transactions on Storage. 1, 2, p. 246-275 30 p.

Princeton University

Research output: Contribution to journalArticle

Digital storage
Bandwidth
Communication
Internet
Takeoff
8 Citations (Scopus)
High definition television
Performance Optimization
MPEG-2
Program processors
Decoding
45 Citations (Scopus)

Tools and applications for large-scale display walls

Wallace, G., Anshus, O. J., Bi, P., Chen, H., Chen, Y., Clark, D., Cook, P., Finkelstein, A., Funkhouser, T. A., Gupta, A., Hibbs, M., Li, K., Liu, Z., Samanta, R., Sukthankar, R. & Troyanskaya, O. G., Jul 1 2005, In : IEEE Computer Graphics and Applications. 25, 4, p. 24-33 10 p.

Princeton University

Research output: Contribution to journalArticle

Display devices
Projection screens
Liquid crystal displays
Pixels
Processing
3 Citations (Scopus)

VI-attached database storage

Zhou, Y., Bilas, A., Jagannathan, S., Xinidis, D., Dubnicki, C. & Li, K., Jan 1 2005, In : IEEE Transactions on Parallel and Distributed Systems. 16, 1, p. 35-50 16 p.

Princeton University

Research output: Contribution to journalArticle

Program processors
Servers
Communication
Application programming interfaces (API)
Transparency
42 Citations (Scopus)

Visualization methods for statistical analysis of microarray clusters

Hibbs, M. A., Dirksen, N. C., Li, K. & Troyanskaya, O. G., May 12 2005, In : BMC bioinformatics. 6, 115.

Princeton University

Research output: Contribution to journalArticle

Microarray Analysis
Microarrays
Microarray
Statistical Analysis
Cluster Analysis
2004
3 Citations (Scopus)

Automatic alignment of tiled displays for a desktop environment

Wallace, G., Chen, H. & Li, K., Dec 1 2004, In : Ruan Jian Xue Bao/Journal of Software. 15, 12, p. 1776-1786 11 p.

Princeton University

Research output: Contribution to journalArticle

Display devices
Visualization
Pixels
Hardware
Degradation
20 Citations (Scopus)

Building the US National Fusion Grid: Results from the National Fusion Collaboratory Project

Schissel, D. P., Burruss, J. R., Finkelstein, A., Flanagan, S. M., Foster, I. T., Fredian, T. W., Greenwald, M. J., Johnson, C. R., Keahey, K., Klasky, S. A., Li, K., McCune, D. C., Papka, M., Peng, Q., Randerson, L., Sanderson, A., Stillerman, J., Stevens, R., Thompson, M. R. & Wallace, G., Jun 1 2004, In : Fusion Engineering and Design. 71, 1-4 SPEC. ISS., p. 245-250 6 p.

Princeton University

Research output: Contribution to journalArticle

Fusion reactions
Computer science
Visualization
Internet
1 Citation (Scopus)

Real-time concurrent collection on stock multiprocessors

Appel, A. W., Ellis, J. R. & Li, K., Apr 1 2004, In : ACM SIGPLAN Notices. 39, 4, p. 207-216 10 p.

Princeton University

Research output: Contribution to journalArticle

Data storage equipment
Copying
Computer hardware
92 Citations (Scopus)

Second-level buffer cache management

Zhou, Y., Chen, Z. & Li, K., Jun 1 2004, In : IEEE Transactions on Parallel and Distributed Systems. 15, 6, p. 505-519 15 p.

Princeton University

Research output: Contribution to journalArticle

Servers
Computer systems
Processing
2003

Dynamic memory management for programmable devices

Kumar, S. & Li, K., Feb 1 2003, In : ACM SIGPLAN Notices. 38, 2 SUPPL., p. 245-255 11 p.

Princeton University

Research output: Contribution to journalArticle

Data storage equipment
Firmware
Interfaces (computer)
Processing
Costs
2002
4 Citations (Scopus)

Data management, code deployment, and scientific visualization to enhance scientific discovery in fusion research through advanced computing

Schissel, D. P., Finkelstein, A., Foster, I. T., Fredian, T. W., Greenwald, M. J., Hansen, C. D., Johnson, C. R., Keahey, K., Klasky, S. A., Li, K., McCune, D. C., Peng, Q., Stevens, R. & Thompson, M. R., Jun 1 2002, In : Fusion Engineering and Design. 60, 3, p. 481-486 6 p.

Princeton University

Research output: Contribution to journalArticle

Data visualization
Information management
Fusion reactions
Distributed computer systems
Computer science
36 Citations (Scopus)

Experiences with VI communication for database storage

Zhou, Y., Bilas, A., Jagannathan, S., Dubnicki, C., Philbin, J. F. & Li, K., Jan 1 2002, In : Conference Proceedings - Annual International Symposium on Computer Architecture, ISCA. p. 257-268 12 p.

Princeton University

Research output: Contribution to journalArticle

Communication
Program processors
Servers
Application programming interfaces (API)
Transparency
11 Citations (Scopus)

Improving progressive view-dependent isosurface propagation

Liu, Z., Finkelstein, A. & Li, K., Apr 1 2002, In : Computers and Graphics (Pergamon). 26, 2, p. 209-218 10 p.

Princeton University

Research output: Contribution to journalArticle

Seed
Casting
2001
28 Citations (Scopus)

Data distribution strategies for high-resolution displays

Chen, H., Chen, Y., Finkelstein, A., Funkhouser, T. A., Li, K., Liu, Z., Samanta, R. & Wallace, G., Oct 1 2001, In : Computers and Graphics (Pergamon). 25, 5, p. 811-818 8 p.

Princeton University

Research output: Contribution to journalArticle

Display devices
Servers
Bandwidth
Data visualization
Image resolution

ESP: A language for programmable devices

Kumar, S., Mandelbaum, Y., Yu, X. & Li, K., May 1 2001, In : SIGPLAN Notices (ACM Special Interest Group on Programming Languages). 36, 5, p. 309-319 11 p.

Princeton University

Research output: Contribution to journalArticle

Firmware
Model checking
Interfaces (computer)
Specifications
2000
85 Citations (Scopus)

Building and using a scalable display wall system

Li, K., Chen, H., Chen, Y., Clark, D. W., Cook, P., Damianakis, S., Essl, G., Finkelstein, A., Funkhouser, T. A., Housel, T., Klein, A., Liu, Z., Praun, E., Samanta, R., Shedd, B., Singh, J. P., Tzanetakis, G. & Zheng, J., Jul 1 2000, In : IEEE Computer Graphics and Applications. 20, 4, p. 29-36 8 p.

Princeton University

Research output: Contribution to journalArticle

41 Citations (Scopus)

Large-format displays

Funkhouser, T. A. & Li, K., Dec 3 2000, In : IEEE Computer Graphics and Applications. 20, 4, p. 20-21 2 p.

Princeton University

Research output: Contribution to journalArticle

Display devices
Technology
Research
1999
57 Citations (Scopus)

Memory Exclusion: Optimizing the Performance of Checkpointing Systems

Plank, J. S., Chen, Y., Li, K., Beck, M. & Kingsley, G., Jan 1 1999, In : Software - Practice and Experience. 29, 2, p. 125-142 18 p.

Princeton University

Research output: Contribution to journalArticle

Data storage equipment
Costs
Experiments
28 Citations (Scopus)
Display devices
Cameras
Feedback
Costs
32 Citations (Scopus)

OS support for general-purpose routers

Peterson, L. L., Karlin, S. C. & Li, K., Jan 1 1999, In : Proceedings of the Workshop on Hot Topics in Operating Systems - HOTOS. p. 38-43 6 p.

Princeton University

Research output: Contribution to journalArticle

Routers
Computer hardware
Computer operating systems
Software architecture
Communication systems
2 Citations (Scopus)

Shared virtual memory with automatic update support

Iftode, L., Blumrich, M., Dubnicki, C., Oppenheimer, D. L., Singh, J. P. & Li, K., Jan 1 1999, In : Proceedings of the International Conference on Supercomputing. p. 175-183 9 p.

Research output: Contribution to journalArticle

Data storage equipment
Hardware
1998
238 Citations (Scopus)

Diskless checkpointing

Plank, J. S., Li, K. & Puening, M. A., Dec 1 1998, In : IEEE Transactions on Parallel and Distributed Systems. 9, 10, p. 972-986 15 p.

Princeton University

Research output: Contribution to journalArticle

Network performance
3 Citations (Scopus)

JTLB: A Mechanism for Address Translation on Network Interfaces

Chen, Y., Bilas, A., Damianakis, S. N., Dubnicki, C. & Li, K., Nov 1 1998, In : SIGPLAN Notices (ACM Special Interest Group on Programming Languages). 33, 11, p. 193-204 12 p.

Princeton University

Research output: Contribution to journalArticle

Interfaces (computer)
Physical addresses
Trace analysis
Data storage equipment
HIgh speed networks
12 Citations (Scopus)

Performance measurements for multithreaded programs

Ji, M., Felten, E. W. & Li, K., Jan 1 1998, In : Performance Evaluation Review. 26, 1, p. 161-170 10 p.

Princeton University

Research output: Contribution to journalArticle

Bandwidth
Program processors
Tuning
Throughput
Monitoring
16 Citations (Scopus)
Synchronization
Data storage equipment
Update
Hardware
Programming
1 Citation (Scopus)

UTLB: A Mechanism for Address Translation on Network Interfaces

Chen, Y., Bilas, A., Damianakis, S. N., Dubnicki, C. & Li, K., Dec 1 1998, In : Operating Systems Review (ACM). 32, 5, p. 193-204 12 p.

Princeton University

Research output: Contribution to journalArticle

Interfaces (computer)
Physical addresses
Trace analysis
Data storage equipment
HIgh speed networks
1997
23 Citations (Scopus)

Design and implementation of virtual memory-mapped communication on Myrinet

Dubnicki, C., Bilas, A., Li, K. & Philbin, J., Jan 1 1997, In : Proceedings of the International Parallel Processing Symposium, IPPS. p. 388-396 9 p.

Princeton University

Research output: Contribution to journalArticle

Data storage equipment
Communication
Computer hardware
Interfaces (computer)
Bandwidth
8 Citations (Scopus)

Relaxed Consistency and Coherence Granularity in DSM Systems: A Performance Evaluation

Zhou, Y., Iftode, L., Singh, J. P., Li, K., Toonen, B. R., Schoinas, I., Hill, M. D. & Wood, D. A., Jan 1 1997, In : SIGPLAN Notices (ACM Special Interest Group on Programming Languages). 32, 7, p. 193-205 13 p.

Rutgers, The State University, Princeton University

Research output: Contribution to journalArticle

Network protocols
Access control
Computer hardware
Data storage equipment
1996
103 Citations (Scopus)
Scheduling
Microprocessor chips
16 Citations (Scopus)

Integrated parallel prefetching and caching

Kimbrel, T., Cao, P., Felten, E. W., Karlin, A. R. & Li, K., Jan 1 1996, In : Performance Evaluation Review. 24, 1, p. 262-263 2 p.

Princeton University

Research output: Contribution to journalArticle

11 Citations (Scopus)

Thread scheduling for cache locality

Philbin, J., Edler, J., Anshus, O. J., Douglas, C. C. & Li, K., Jan 1 1996, In : SIGPLAN Notices (ACM Special Interest Group on Programming Languages). 31, 9, p. 60-71 12 p.

Princeton University

Research output: Contribution to journalArticle

Scheduling
Application programs
Experiments
15 Citations (Scopus)

Thread scheduling for cache locality

Philbin, J., Edler, J., Anshus, O. J., Douglas, C. C. & Li, K., Oct 1 1996, In : Computer architecture news. 24, Special Issu, p. 60-71 12 p.

Research output: Contribution to journalArticle

Scheduling
Application programs
Experiments
20 Citations (Scopus)

Thread scheduling for cache locality

Philbin, J., Edler, J., Anshus, O. J., Douglas, C. C. & Li, K., Jan 1 1996, In : Operating Systems Review (ACM). 30, 5, p. 60-71 12 p.

Princeton University

Research output: Contribution to journalArticle

Scheduling
Application programs
Experiments
1995

Multiprocessor cache coherence based on virtual memory support

Petersen, K. & Li, K., Jan 1 1995, In : Journal of Parallel and Distributed Computing. 29, 2, p. 158-178 21 p.

Princeton University

Research output: Contribution to journalArticle

Cache Coherence
Virtual Memory
Multiprocessor
Data storage equipment
Trade-offs
43 Citations (Scopus)

Virtual-Memory-Mapped Network Interfaces

Blumrich, M. A., Dubnicki, C., Felten, E. W., Li, K. & Mesarina, M. R., Jan 1 1995, In : IEEE Micro. 15, 1, p. 21-28 8 p.

Princeton University

Research output: Contribution to journalArticle

Message passing
Interfaces (computer)
Data storage equipment
Communication
Costs
1994
61 Citations (Scopus)

Ickp: A Consistent Checkpointer for Multicomputers

Plank, J. S. & Li, K., Jan 1 1994, In : IEEE Parallel and Distributed Technology. 2, 2, p. 62-67 6 p.

Princeton University

Research output: Contribution to journalArticle

78 Citations (Scopus)

Low-Latency, Concurrent Checkpointing for Parallel Programs

Li, K., Jan 1 1994, In : IEEE Transactions on Parallel and Distributed Systems. 5, 8, p. 874-879 6 p.

Princeton University

Research output: Contribution to journalArticle

Data storage equipment
144 Citations (Scopus)

Virtual memory mapped network interface for the SHRIMP multicomputer

Blumrich, M. A., Li, K., Alpert, R., Dubnicki, C., Felten, E. W. & Sandberg, J., Jan 1 1994, In : Conference Proceedings - Annual International Symposium on Computer Architecture, ISCA. p. 142-153 12 p.

Princeton University

Research output: Contribution to journalArticle

Message passing
Interfaces (computer)
Data storage equipment
Bandwidth
Data transfer
1992
46 Citations (Scopus)

Heterogeneous Distributed Shared Memory

Zhou, S., Stumm, M., Wortman, D. & Li, K., Jan 1 1992, In : IEEE Transactions on Parallel and Distributed Systems. 3, 5, p. 540-554 15 p.

Princeton University

Research output: Contribution to journalArticle

Data storage equipment
Transparency
Communication
6 Citations (Scopus)

Software Support for Speculative Loads

Rogers, A. & Li, K., Jan 9 1992, In : ACM SIGPLAN Notices. 27, 9, p. 38-50 13 p.

Princeton University

Research output: Contribution to journalArticle

1991
10 Citations (Scopus)

An efficient checkpointing method for multicomputers with wormhole routing

Li, K., Naughton, J. F. & Plank, J. S., Jun 1 1991, In : International Journal of Parallel Programming. 20, 3, p. 159-180 22 p.

Princeton University

Research output: Contribution to journalArticle

Wormhole Routing
Checkpointing
Multicomputers
Network routing
Checkpoint