Research output per year
Research output per year
- 1 - 50 out of 85 results
Search results
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2023
Guidelines for the reuse of ontology content
Halper, M., Soldatova, L. N., Brochhausen, M., Sabiu Maikore, F., Ochs, C. & Perl, Y., 2023, In: Applied Ontology. 18, 1, p. 5-29 25 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
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2020
Missing lateral relationships in top-level concepts of an ontology
Zheng, L., Chen, Y., Min, H., Hildebrand, P. L., Liu, H., Halper, M., Geller, J., de Coronado, S. & Perl, Y., Dec 2020, In: BMC Medical Informatics and Decision Making. 20, 305.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
2019
Deep learning in the IT curriculum
Hoover, A. K., Spryszynski, A. & Halper, M., Sep 26 2019, SIGITE 2019 - Proceedings of the 20th Annual Conference on Information Technology Education. Association for Computing Machinery, Inc, p. 49-54 6 p. (SIGITE 2019 - Proceedings of the 20th Annual Conference on Information Technology Education).New Jersey Institute of Technology
Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
Open Access2 Scopus citations -
Quality assurance of complex ChEBI concepts based on number of relationship types
Yumak, H., Zheng, L., Chen, L., Halper, M., Perl, Y. & Owen, G., 2019, In: Applied Ontology. 14, 3, p. 199-214 16 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
2 Scopus citations -
Quality Assurance of Concept Roles in the National Cancer Institute thesaurus
Zheng, L., Chen, Y., Perl, Y., Halper, M., Geller, J. & De Coronado, S., Jan 21 2019, Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018. Schmidt, H., Griol, D., Wang, H., Baumbach, J., Zheng, H., Callejas, Z., Hu, X., Dickerson, J. & Zhang, L. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 2001-2008 8 p. 8621277. (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018).New Jersey Institute of Technology
Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
2 Scopus citations -
2018
A Two-Level Taxonomy Abstraction Network for a Terminology, Based on a Partition into Disjoint Partial Areas
Perl, Y. (Inventor), Geller, J. (Inventor), Halper, M. (Inventor) & Wang, Y. (. (Inventor), Jul 2018New Jersey Institute of Technology
Research output: Innnovation › Patent
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Quality assurance of ontology content reuse
Halper, M., Ochs, C., Perl, Y., Arabandi, S. & Musen, M. A., 2018, In: CEUR Workshop Proceedings. 2285New Jersey Institute of Technology
Research output: Contribution to journal › Conference article › peer-review
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Using Convolutional Neural Networks to Support Insertion of New Concepts into SNOMED CT
Liu, H., Geller, J., Halper, M. & Perl, Y., Jan 1 2018, In: AMIA ... Annual Symposium proceedings. AMIA Symposium. 2018, p. 750-759 10 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
4 Scopus citations -
2017
Introducing the Big Knowledge to Use (BK2U) challenge
Perl, Y., Geller, J., Halper, M., Ochs, C., Zheng, L. & Kapusnik-Uner, J., Jan 1 2017, In: Annals of the New York Academy of Sciences. 1387, 1, p. 12-24 13 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Relating complexity and error rates of ontology concepts: More complex NCIt concepts have more errors
Min, H., Zheng, L., Perl, Y., Halper, M., De Coronado, S. & Ochs, C., 2017, In: Methods of Information in Medicine. 56, 3, p. 200-208 9 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
6 Scopus citations -
Summarizing an Ontology: A "Big Knowledge" Coverage Approach
Zheng, L., Perl, Y., Elhanan, G., Ochs, C., Geller, J. & Halper, M., 2017, MEDINFO 2017: Precision Healthcare through Informatics - Proceedings of the 16th World Congress on Medical and Health Informatics. Gundlapalli, A. V., Marie-Christine, J. & Dongsheng, Z. (eds.). IOS Press BV, p. 978-982 5 p. (Studies in Health Technology and Informatics; vol. 245).New Jersey Institute of Technology
Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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Taxonomy-Based Approaches to Quality Assurance of Ontologies
Halper, M., Perl, Y., Ochs, C. & Zheng, L., 2017, In: Journal of Healthcare Engineering. 2017, 3495723.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
2016
A quality-assurance study of ChEBI
Yumak, H., Chen, L., Halper, M., Zheng, L., Perl, Y. & Elhanan, G., 2016, In: CEUR Workshop Proceedings. 1747New Jersey Institute of Technology
Research output: Contribution to journal › Conference article › peer-review
1 Scopus citations -
Quality assurance of the gene ontology using abstraction networks
Ochs, C., Perl, Y., Halper, M., Geller, J. & Lomax, J., Jun 1 2016, In: Journal of bioinformatics and computational biology. 14, 3, 1642001.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
16 Scopus citations -
Quality assurance of UMLS semantic type assignments using SNOMED CT hierarchies
Gu, H. H., Chen, Y., He, Z., Halper, M. & Chen, L., 2016, In: Methods of Information in Medicine. 55, 2, p. 158-165 8 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
2015
Abstraction networks for terminologies: Supporting management of "big knowledge"
Halper, M., Gu, H., Perl, Y. & Ochs, C., May 1 2015, In: Artificial Intelligence In Medicine. 64, 1, p. 1-16 16 p.New Jersey Institute of Technology
Research output: Contribution to journal › Review article › peer-review
Open Access38 Scopus citations -
Gene ontology summarization to support visualization and quality assurance
Ochs, C., Perl, Y., Halper, M., Geller, J. & Lomax, J., 2015, Proceedings of the 7th International Conference on Bioinformatics and Computational Biology, BICOB 2015. Haspel, N. & Saeed, F. (eds.). The International Society for Computers and Their Applications (ISCA), p. 167-174 8 p. (Proceedings of the 7th International Conference on Bioinformatics and Computational Biology, BICOB 2015).New Jersey Institute of Technology
Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
7 Scopus citations -
Structural measures to track the evolution of SNOMED CT hierarchies
Wei, D., Helen Gu, H., Perl, Y., Halper, M., Ochs, C., Elhanan, G. & Chen, Y., Oct 1 2015, In: Journal of Biomedical Informatics. 57, p. 278-287 10 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
2014
Using android as a platform for programming in the IT curriculum
Halper, M., Oct 14 2014, SIGITE 2014 - Proceedings of the 15th Annual Conference on Information Technology Education. Association for Computing Machinery, p. 127-132 6 p. (SIGITE 2014 - Proceedings of the 15th Annual Conference on Information Technology Education).New Jersey Institute of Technology
Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
2 Scopus citations -
2013
A family-based framework for supporting quality assurance of biomedical ontologies in BioPortal.
He, Z., Ochs, C., Agrawal, A., Perl, Y., Zeginis, D., Tarabanis, K., Elhanan, G., Halper, M., Noy, N. & Geller, J., 2013, In: AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 2013, p. 581-590 10 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
20 Scopus citations -
Choosing the granularity of abstraction networks for orientation and quality assurance of the sleep domain ontology
Ochs, C., He, Z., Perl, Y., Arabandi, S., Halper, M. & Geller, J., 2013, In: CEUR Workshop Proceedings. 1060, p. 84-89 6 p.New Jersey Institute of Technology
Research output: Contribution to journal › Conference article › peer-review
9 Scopus citations -
Scalability of abstraction-network-based quality assurance to large SNOMED hierarchies.
Ochs, C., Perl, Y., Geller, J., Halper, M., Gu, H., Chen, Y. & Elhanan, G., 2013, In: AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 2013, p. 1071-1080 10 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
22 Scopus citations -
The readiness of SNOMED problem list concepts for meaningful use of electronic health records
Agrawal, A., He, Z., Perl, Y., Wei, D., Halper, M., Elhanan, G. & Chen, Y., Jun 2013, In: Artificial Intelligence In Medicine. 58, 2, p. 73-80 8 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
21 Scopus citations -
2012
Abstraction of complex concepts with a refined partial-area taxonomy of SNOMED
Wang, Y., Halper, M., Wei, D., Perl, Y. & Geller, J., Feb 2012, In: Journal of Biomedical Informatics. 45, 1, p. 15-29 15 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access35 Scopus citations -
A chemical specialty semantic network for the unified medical language system
Paul Morrey, C., Perl, Y., Halper, M., Chen, L. & Gu, H., May 2012, In: Journal of Cheminformatics. 4, 5, 9.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access10 Scopus citations -
Auditing complex concepts of SNOMED using a refined hierarchical abstraction network
Wang, Y., Halper, M., Wei, D., Gu, H., Perl, Y., Xu, J., Elhanan, G., Chen, Y., Spackman, K. A., Case, J. T. & Hripcsak, G., Feb 2012, In: Journal of Biomedical Informatics. 45, 1, p. 1-14 14 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access43 Scopus citations -
Clinical clarity versus terminological order - The readiness of SNOMED CT concept descriptors for primary care
He, Z., Halper, M., Perl, Y. & Elhanan, G., 2012, MIX-HS'12 - Proceedings of the 2nd International Workshop on Managing Interoperability and Complexity in Health Systems, Co-located with CIKM 2012. p. 1-6 6 p. (International Conference on Information and Knowledge Management, Proceedings).New Jersey Institute of Technology
Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
Open Access3 Scopus citations -
Deriving an abstraction network to support quality assurance in OCRe.
Ochs, C., Agrawal, A., Perl, Y., Halper, M., Tu, S. W., Carini, S., Sim, I., Noy, N., Musen, M. & Geller, J., 2012, In: Unknown Journal. 2012, p. 681-689 9 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
15 Scopus citations -
Questionable relationship triples in the UMLS
Gu, H., Elhanan, G., Halper, M. & He, Z., 2012, Proceedings - IEEE-EMBS International Conference on Biomedical and Health Informatics: Global Grand Challenge of Health Informatics, BHI 2012. p. 713-716 4 p. 6211682. (Proceedings - IEEE-EMBS International Conference on Biomedical and Health Informatics: Global Grand Challenge of Health Informatics, BHI 2012).New Jersey Institute of Technology
Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
4 Scopus citations -
Using SNOMED semantic concept groupings to enhance semantic-type assignment consistency in the UMLS
Wei, D., Halper, M. & Elhanan, G., 2012, IHI'12 - Proceedings of the 2nd ACM SIGHIT International Health Informatics Symposium. p. 825-829 5 p. (IHI'12 - Proceedings of the 2nd ACM SIGHIT International Health Informatics Symposium).New Jersey Institute of Technology
Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
3 Scopus citations -
2011
Auditing hierarchical cycles to locate other inconsistencies in the UMLS.
Halper, M., Morrey, C. P., Chen, Y., Elhanan, G., Hripcsak, G. & Perl, Y., 2011, In: AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 2011, p. 529-536 8 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
12 Scopus citations -
Multimedia-based visual programming promoting core competencies in IT education
Manzo, V. J., Halper, M. & Halper, M., 2011, SIGITE'11 - Proceedings of the 2011 ACM Special Interest Group for Information Technology Education Conference. p. 203-208 6 p. (SIGITE'11 - Proceedings of the 2011 ACM Special Interest Group for Information Technology Education Conference).New Jersey Institute of Technology
Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
2 Scopus citations -
Resolution of redundant semantic type assignments for organic chemicals in the UMLS
Morrey, C. P., Chen, L., Halper, M. & Perl, Y., Jul 2011, In: Artificial Intelligence In Medicine. 52, 3, p. 141-151 11 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
2010
Auditing SNOMED Integration into the UMLS for Duplicate Concepts
Huang, K. C., Geller, J., Elhanan, G., Perl, Y. & Halper, M., 2010, In: AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 2010, p. 321-325 5 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Dissimilarities in the Logical Modeling of Apparently Similar Concepts in SNOMED CT
Agrawal, A., Elhanan, G. & Halper, M., 2010, In: AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 2010, p. 212-216 5 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
12 Scopus citations -
2009
Auditing SNOMED relationships using a converse abstraction network.
Wei, D., Halper, M., Elhanan, G., Chen, Y., Perl, Y., Geller, J. & Spackman, K. A., 2009, In: AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 2009, p. 685-689 5 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
10 Scopus citations -
Comparing inconsistent relationship configurations indicating UMLS errors.
Geller, J., Morrey, C. P., Xu, J., Halper, M., Elhanan, G., Perl, Y. & Hripcsak, G., 2009, In: AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 2009, p. 193-197 5 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
8 Scopus citations -
Expanding the Extent of a UMLS Semantic Type via Group Neighborhood Auditing
Chen, Y., Gu, H., Perl, Y., Halper, M. & Xu, J., Sep 2009, In: Journal of the American Medical Informatics Association. 16, 5, p. 746-757 12 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access18 Scopus citations -
Modeling Multi-typed Structurally Viewed Chemicals with the UMLS Refined Semantic Network
Chen, L., Morrey, C. P., Gu, H., Halper, M. & Perl, Y., Jan 2009, In: Journal of the American Medical Informatics Association. 16, 1, p. 116-131 16 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access7 Scopus citations -
Special Issue on Auditing of Terminologies
Geller, J., Perl, Y., Halper, M. & Cornet, R., Jun 2009, In: Journal of Biomedical Informatics. 42, 3, p. 407-411 5 p.New Jersey Institute of Technology
Research output: Contribution to journal › Editorial › peer-review
Open Access36 Scopus citations -
Structural group auditing of a UMLS semantic type's extent
Chen, Y., Gu, H., Perl, Y., Geller, J. & Halper, M., Feb 2009, In: Journal of Biomedical Informatics. 42, 1, p. 41-52 12 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access15 Scopus citations -
The Neighborhood Auditing Tool: A hybrid interface for auditing the UMLS
Morrey, C. P., Geller, J., Halper, M. & Perl, Y., Jun 2009, In: Journal of Biomedical Informatics. 42, 3, p. 468-489 22 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access26 Scopus citations -
Using WordNet synonym substitution to enhance UMLS source integration
Huang, K. C., Geller, J., Halper, M., Perl, Y. & Xu, J., Jun 2009, In: Artificial Intelligence In Medicine. 46, 2, p. 97-109 13 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access15 Scopus citations -
2008
Auditing complex concepts in overlapping subsets of SNOMED.
Wang, Y., Wei, D., Xu, J., Elhanan, G., Perl, Y., Halper, M., Chen, Y., Spackman, K. A. & Hripcsak, G., 2008, In: AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. p. 273-277 5 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
12 Scopus citations -
Automated comparative auditing of NCIT genomic roles using NCBI
Cohen, B., Oren, M., Min, H., Perl, Y. & Halper, M., Dec 2008, In: Journal of Biomedical Informatics. 41, 6, p. 904-913 10 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access12 Scopus citations -
Complexity measures to track the evolution of a SNOMED hierarchy.
Wei, D., Wang, Y., Perl, Y., Xu, J., Halper, M. & Spackman, K. A., 2008, In: AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. p. 778-782 5 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
4 Scopus citations -
Detecting role errors in the gene hierarchy of the NCI thesaurus
Min, H., Cohen, B., Halper, M., Oren, M. & Perl, Y., 2008, In: Cancer Informatics. 6, p. 293-313 21 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
2007
Analysis of error concentrations in SNOMED.
Halper, M., Wang, Y., Min, H., Chen, Y., Hripcsak, G., Perl, Y. & Spackman, K. A., 2007, In: AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. p. 314-318 5 p.Research output: Contribution to journal › Article › peer-review
32 Scopus citations -
Ownership as a conceptual modeling construct
Halper, M., Liu, L. M., Geller, J. & Perl, Y., Aug 2007, In: Data and Knowledge Engineering. 62, 2, p. 248-273 26 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Piecewise synonyms for enhanced UMLS source terminology integration.
Huang, K. C., Geller, J., Halper, M. & Cimino, J. J., 2007, In: AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. p. 339-343 5 p.New Jersey Institute of Technology
Research output: Contribution to journal › Article › peer-review
12 Scopus citations