Ligand Depot: A data warehouse for ligands bound to macromolecules

Zukang Feng, Li Chen, Himabindu Maddula, Ozgur Akcan, Rose Oughtred, Helen M. Berman, John Westbrook

Research output: Contribution to journalArticlepeer-review

134 Scopus citations

Abstract

Summary: Ligand Depot is an integrated data resource for finding information about small molecules bound to proteins and nucleic acids. The initial release (version 1.0, November, 2003) focuses on providing chemical and structural information for small molecules found as part of the structures deposited in the Protein Data Bank. Ligand Depot accepts keyword-based queries and also provides a graphical interface for performing chemical substructure searches. A wide variety of web resources that contain information on small molecules may also be accessed through Ligand Depot.

Original languageEnglish (US)
Pages (from-to)2153-2155
Number of pages3
JournalBioinformatics
Volume20
Issue number13
DOIs
StatePublished - Sep 1 2004

ASJC Scopus subject areas

  • Statistics and Probability
  • Biochemistry
  • Molecular Biology
  • Computer Science Applications
  • Computational Theory and Mathematics
  • Computational Mathematics

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