Modeling microbial metabolic trade-offs in a chemostat

Zhiyuan Li, Bo Liu, Sophia Hsin Jung Li, Christopher G. King, Zemer Gitai, Ned S. Wingreen

Research output: Contribution to journalArticlepeer-review

Abstract

Microbes face intense competition in the natural world, and so need to wisely allocate their resources to multiple functions, in particular to metabolism. Understanding competition among metabolic strategies that are subject to trade-offs is therefore crucial for deeper insight into the competition, cooperation, and community assembly of microorganisms. In this work, we evaluate competing metabolic strategies within an ecological context by considering not only how the environment influences cell growth, but also how microbes shape their chemical environment. Utilizing chemostat-based resource-competition models, we exhibit a set of intuitive and general procedures for assessing metabolic strategies. Using this framework, we are able to relate and unify multiple metabolic models, and to demonstrate how the fitness landscape of strategies becomes intrinsically dynamic due to species-environment feedback. Such dynamic fitness landscapes produce rich behaviors, and prove to be crucial for ecological and evolutionarily stable coexistence in all the models we examined.

Original languageAmerican English
Article numbere1008156
JournalPLoS computational biology
Volume16
Issue number8
DOIs
StatePublished - Aug 2020

ASJC Scopus subject areas

  • Genetics
  • Ecology, Evolution, Behavior and Systematics
  • Cellular and Molecular Neuroscience
  • Molecular Biology
  • Ecology
  • Computational Theory and Mathematics
  • Modeling and Simulation

Fingerprint

Dive into the research topics of 'Modeling microbial metabolic trade-offs in a chemostat'. Together they form a unique fingerprint.

Cite this