Multistep modeling (MSM) of biomolecular structure application to the A-G mispair in the B-DNA environment.

S. Srinivasan, G. Raghunathan, M. Shibata, R. Rein

Research output: Contribution to journalArticlepeer-review

2 Scopus citations

Abstract

A multistep modeling procedure has been evolved to study the structural changes introduced by lesions in DNA. We report here the change in the structure of regular B-DNA geometry due to the incorporation of Ganti-Aanti mispair in place of a regular G-C pair, preserving the helix continuity. The energetics of the structure so obtained is compared with the Ganti-Asyn configuration under similar constrained conditions. We present the methodology adopted and discuss the results.

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