PIM-Aligner: A Processing-in-MRAM Platform for Biological Sequence Alignment

Keyphrases

• Aligners 100%
• Biological Sequence Alignment 100%
• High-throughput 40%
• Short Read Alignment 40%
• SOT-MRAM 40%
• FM-index 40%
• High Energy 20%
• Computational Memory 20%
• Hardware Efficiency 20%
• Partitioning Method 20%
• Data pipeline 20%
• Mapping Method 20%
• Dynamic Programming 20%
• Local Data 20%
• Index-based 20%
• Sequence Alignment Algorithms 20%
• In-memory 20%
• Parallelization 20%
• Alignment Algorithm 20%
• Alignment Method 20%
• Data Partitioning 20%
• Resistive Random Access Memory (ReRAM) 20%
• Data Mapping 20%
• Chip Area 20%
• Chipless 20%
• Algorithm-based 20%
• Platform-based 20%
• In-memory Accelerator 20%

Computer Science

• High Throughput 100%
• Sequence Alignment 100%
• Biological Sequence 100%
• Energy Efficient 50%
• Dynamic Programming 50%
• Application Specific Integrated Circuit 50%
• Parallelism 50%
• In-Memory Processing 50%
• Data Partitioning 50%
• Backtracking 50%